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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908406.1_cds_XP_016458537.1_52155
CDS Infomation

[gene=LOC107782197] [db_xref=GeneID:107782197] [protein=translation initiation factor IF-2-like] [protein_id=XP_016458537.1] [location=complement(join(39034..39441,39693..40586,40913..41036,41461..41566,41913..42087))] [gbkey=CDS]
Sequence

ATGAATCGGAGCTTCAGAGATTCAATGATCAGCGGGAAGAATTTTCCTATATCGTCACAG
CACCGGCGAGGTCTTAGTCTTAACGGAGCTTCTAGAGAGCAGCATGATGATAACTTGGAT
CTCTTCTCCAAAAGTCGCCGCAGTATCTCCGTTGCATCCTCCGACGAATCCGATGTTTCG
GTTAAACTGGGGAGGCTTTCAATTGGATCAGTGAAGCAAGTAAAGAGTGGATTAGAGGAT
CTGATAGCATCTACCGAGGGAGATAAGCATGATTACGATTGGCTCCTCACTCCGCCAGGA
ACTCCCCTTGTTCCTTCATCAGATGGAGGTGAATCAAAACCAGCTTCAGCGGCTCCAAGA
GGAAGCTCATTGGGCAGATCTGCCTCCACTACTAAGGCCTCAAGGCTTTCAGTGTCTCAT
TCAGAGAGCAATACTCCTGCAAGACCAACTCGGAGTAATTCTGTGACTCGACCTTCCATT
TCTAGCTCTCAGTACAGTAGTTACTCAAATAAATCAGGCTCTATTCTAAACACAAGCTCT
GCATCAGTCTCCTCCTATATTAGACCATCTACGCCGACAAGCCGTTCTTCTTCTTCAGCC
AGGCCTTCCACCCCGACTTCCCGTGCAACTGTGTCCAGACCTTCAACTCCTTCTAGAGTC
CGCCAAGCCCCAAGTACTCCTTCTAGGCCAACCCAAAGCTCAAGACCTTCTACTCCAACT
TCCCGGGCCCAAATACCAGCAAACTTGAGTACCCCTGCTGCTCGGTCTACTTCAAGGCCT
TCAACACCTACTCGTCGGAACATAACACCTTCATTGTCTCCAGCTTCTAGATCGTCAACT
CCAGCAGGGCGCTCTGTCACCAATGGACGACCTGCAGCTTCTGTTTCTCGTCCAAGCTCC
CCTAGTCCCCAAGTTCGTCGACCATCACAACCAATAGTTCCCCCAGATTTTTCACTTGAA
ACGCCTCCAAACCTACGCACAACTCTGCCAGACAGGCCTCTGTCTGCTGGTAGGTCCAGG
CCAAATCCTTCTGTCACTACCAAGGCAAATGCAGAAATCCCAAGTGTGGCAAATCCTCGG
AGACAGTCATCACCCATTGTTAGCAGGGGAAGACTAACAGAACCCTCTGGTAGAGGACGA
GTGCTTGGCGGAGGGCAACTTAATGATATTTCTGATTCCCGCAGGGCTTCACATGTCTCA
GAATTGTCTACAAGGAAGCCTGTAAAGGCTGCTACTGATAGCACGGGACTTGGAAGGACA
ATTTCTAAGAAATCTCTTGACGTGGCAATCAGGCATATGGATATTAGAAATGGCCTTAAT
GGTGTTCGTCCACTTTCTGGCTCAACCCTCTTTCCACATAGTATTCGCTCCACAAATGGG
AAAAACCAGCCTTCTCATGGTTCGACTGCCCCATCCTCTACCAATGAGAATGCATCTTAC
CACTACAATGGTAATCTTCCTGAGAATGGAAATTACCTTAACAGGTTATCTGAGAATGGG
AGTGAAGAGGGCAAGTCTCAATATTCAGCAAAATTGACAGACATTGATATTTATGAGAGT
TCTCGTTATGATGCGCTTCTGCTGAAAGAGGATTTGAAGAACACAAATTGGCTGCACAGC
ATCGATGACAAGTCGGATCAAGAAACGTTATTTGACAACGGATTTGAGTCGCTACCTGAA
CCTTTTAGCCCTTTGCAGCATTTGTGA

Peptide Sequence

PEP ID

XP_016458537.1
PEP Infomation

PREDICTED: translation initiation factor IF-2-like [Nicotiana tabacum]
Sequence

MNRSFRDSMISGKNFPISSQHRRGLSLNGASREQHDDNLDLFSKSRRSISVASSDESDVS
VKLGRLSIGSVKQVKSGLEDLIASTEGDKHDYDWLLTPPGTPLVPSSDGGESKPASAAPR
GSSLGRSASTTKASRLSVSHSESNTPARPTRSNSVTRPSISSSQYSSYSNKSGSILNTSS
ASVSSYIRPSTPTSRSSSSARPSTPTSRATVSRPSTPSRVRQAPSTPSRPTQSSRPSTPT
SRAQIPANLSTPAARSTSRPSTPTRRNITPSLSPASRSSTPAGRSVTNGRPAASVSRPSS
PSPQVRRPSQPIVPPDFSLETPPNLRTTLPDRPLSAGRSRPNPSVTTKANAEIPSVANPR
RQSSPIVSRGRLTEPSGRGRVLGGGQLNDISDSRRASHVSELSTRKPVKAATDSTGLGRT
ISKKSLDVAIRHMDIRNGLNGVRPLSGSTLFPHSIRSTNGKNQPSHGSTAPSSTNENASY
HYNGNLPENGNYLNRLSENGSEEGKSQYSAKLTDIDIYESSRYDALLLKEDLKNTNWLHS
IDDKSDQETLFDNGFESLPEPFSPLQHL

Transcript Sequence

Gene sequence data has not been registered.